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Intro to Spatial Transcriptomics
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Table of contents
1
Overview
2
Introduction
3
Study background
4
Understanding our spatial data
5
Quality control and filtering
6
Normalisation and scaling
7
Reduce dimensionality - UMAPs
8
Batch Correction
9
Clustering
10
Clustering Labeling
11
Spatially Restricted Genes
12
Summary
13
Next steps
14
Resources
References
References
14
Resources
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References