14 Next steps

14.1 The scope of what was done with this data:

Wrap up (10) We have preprocessed some data, now run tests/do analysis => spatial sampler resource.

Summarise what Garrido-Trigo et al actually did with this dataset in their paper;

  • Macrophage proximity tests
  • Integration with single cell data
  • integration with other spatial omics

14.2 Other techniques.

Q&A (whatever)

Extra: AboutSegmentation? Use defaults.

Questions to address

  • How do we combine multiple samples
  • How to annotate multiple samples on one slide (I wish I knew)
  • How do I do X